CrimsonCanary

Entries categorized as ‘Database’

Symyx to acquire MDL

August 10, 2007 · 1 Comment

News for all the chemists out there is that Elsevier have sold MDL to Symyx
(including Beilstein/Crossfire) .

What does that mean? Well I guess it may lead to better bench tools for chemists and better integration with lab hardware/software. Will it mean less emphasis on database development? Possibly though MDL’s databases never seemed to be big sellers somehow (with the exception of Beilstein of course).

I’ve always thought that MDL interfaces could do with some cleaning up and modernization (not that I have had much of a change to play with Discoverygate which of course is their web interface) so hopefully with a better understanding of the needs of bench chemist’s that’s what Symyx will do.
MDL never seemed a terribly good fit with Elsevier somehow whose primary markets are not chemists.  Time will tell if it turns out to be better or worse for customers.

Categories: Chemistry · Database · Pharmaceutical · Search Engines · Searching

Human Metabolome Database

February 2, 2007 · No Comments

The Human Metabolome Database is a database of information about small molecule metabolites found in the human body. It is maintained by a team at the University of Alberta, Canada.

It links to three kinds of data: 1) chemical data, 2) clinical data, and 3) molecular biology/biochemistry data.  There are currently over 2100 metabolite entries, linked to over 5500 protein (and DNA) sequences

More information about the project can be found here.

Categories: Database · Reference · metabolism

The Big Picture Book of Viruses

December 21, 2006 · No Comments

The Big Picture Book of Viruses is a great website if you want to find pictures of particular viruses - and find classification information. Pages are ordered by Name, Structure/Genome, Host and Disease makeing it easy to find what you are looking for with whatever starting information you have. This page is a useful page if you want to quickly look up the causative agent of a disease

herpesvirus.gif

Categories: Database · Images · Reference · Virology

The OMIM database

December 19, 2006 · No Comments

Probably a fairly well known reference to many of you - the OMIM database is a database of diseases with a genetic component. It is maintained by Johns Hopkins University. Its a good place to look up information on diseases and to also find synonyms of disease names.

It can be searched via this webpage

Categories: Biotechnology · Database · Genetics · Reference

US Cancer Statistics

November 13, 2006 · No Comments

Starting off today on a somewhat somber note…cancer epidemiology. It’s not surprising that as diseases go, resources for cancer are pretty easy to come by.

Data’s available from several national agencies:

ACS (American Cancer Society)


Cancer Statistics for 2006

Most requested graphs and data

ACS Powerpoint Presentation

National Cancer Institute

General Page

2006 Annual Report

Categories: Cancer · Database · Epidemiology · US